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SRX3578029: Mapped reads for uncultivated Chryseobacterium bacterium UBA11285 genome recovered from ERX644123
1 ILLUMINA (Illumina HiSeq 2000) run: 1.4M spots, 245.8M bases, 112.3Mb downloads

Design: Reads from ERX644123 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA11285 genome.
Submitted by: University of Queensland
Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.
PRJNA417962 • SRP130174 • All experiments • All runs
show Abstracthide Abstract
Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.
Sample: Uncultivated Chryseobacterium bacterium UBA11285 genome recovered from ERX644123
SAMN08017572 • SRS2847757 • All experiments • All runs
Organism: Chryseobacterium sp.
Library:
Name: UBA11285_library
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: METAGENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.4M spots, 245.8M bases, 112.3Mb
Run# of Spots# of BasesSizePublished
SRR64882561,408,410245.8M112.3Mb2018-02-23

ID:
4963531

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